TOP TEN perturbations for AT5G12110 (Arabidopsis thaliana)

Organism: Arabidopsis thaliana
Gene: AT5G12110
Selected probe(set): 250304_at
Platform: Affymetrix Arabidopsis ATH1 Genome Array

Expression of AT5G12110 (250304_at) across 3240 perturbations tested by GENEVESTIGATOR:

shift 28°C to 19°C study 3 (35S:RPS4-HS) / 28°C (35S:RPS4-HS)

Relative Expression (log2-ratio):-6.805991
Number of Samples:3 / 3
Experimental shift 28°C to 19°C study 3 (35S:RPS4-HS)
Leaf samples of 35S:RPS4-HS plants grown for 3.5 weeks on soil at 28°C and then shifted to 19°C for 24h. Other conditions: growth chamber, 10h light (150-200µmol photons m-2 s-1) / 14h dark cycles, 65% relative humidity.
Control 28°C (35S:RPS4-HS)
Leaf samples of 35S:RPS4-HS plants grown for 3.5 weeks on soil at 28°C under 10h light (150-200µmol photons m-2 s-1) / 14h dark cycles, 65% relative humidity.

shift 28°C to 19°C study 3 (35S:RPS4-HS rrs1-11) / 28°C (35S:RPS4-HS rrs1-11)

Relative Expression (log2-ratio):-6.653207
Number of Samples:3 / 3
Experimental shift 28°C to 19°C study 3 (35S:RPS4-HS rrs1-11)
Leaf samples of 35S:RPS4-HS rrs1-11 plants grown for 3.5 weeks on soil at 28°C and then shifted to 19°C for 24h. Other conditions: growth chamber, 10h light (150-200µmol photons m-2 s-1) / 14h dark cycles, 65% relative humidity.
Control 28°C (35S:RPS4-HS rrs1-11)
Leaf samples of 35S:RPS4-HS rrs1-11 plants grown for 3.5 weeks on soil at 28°C under 10h light (150-200µmol photons m-2 s-1) / 14h dark cycles, 65% relative humidity.

heat study 2 (ws) / untreated leaf samples (ws)

Relative Expression (log2-ratio):6.446226
Number of Samples:2 / 2
Experimental heat study 2 (ws)
Wild type (ws) leaf samples after one hour heat treatment (37°C).
Control untreated leaf samples (ws)
Not available.

shift low to high light study 3 (0.5h) / low light study 4 (6h)

Relative Expression (log2-ratio):6.3578672
Number of Samples:3 / 3
Experimental shift low to high light study 3 (0.5h)
Detached rosette leaves of 3.5-week-old Col-0 plants were kept in a growth chamber for 6h under low light (65µmol photons m-2 s-1) at 22°C, then exposed for 30min to high light (1300µmol photons m-2 s-1) at 22°C, and then harvested.
Control low light study 4 (6h)
Detached rosette leaves of 3.5- week-old Col-0 plants were kept in a growth chamber for 6h under low light (65µmol photons m-2 s-1) at 22°C and then harvested.

heat study 11 (Col) / untreated seedling samples (Col)

Relative Expression (log2-ratio):6.355529
Number of Samples:3 / 3
Experimental heat study 11 (Col)
Seedling samples of Col grown for 11 days on peat pellets under 14h light (100μmol photons m-2 s-1) / 10h dark cycles, 70% relative humidity at 21°C, then transferred to 40°C (100μmol photons m-2 s-1) for 1h.
Control untreated seedling samples (Col)
Seedling samples of Col grown for 11 days on peat pellets under 14h light (100μmol photons m-2 s-1) / 10h dark cycles, 70% relative humidity at 21°C.

heat study 11 (mbf1c) / untreated seedling samples (mbf1c)

Relative Expression (log2-ratio):6.338105
Number of Samples:3 / 3
Experimental heat study 11 (mbf1c)
Seedling samples of mbf1c grown for 11 days on peat pellets under 14h light (100μmol photons m-2 s-1) / 10h dark cycles, 70% relative humidity at 21°C, then transferred to 40°C (100μmol photons m-2 s-1) for 1h.
Control untreated seedling samples (mbf1c)
Seedling samples of mbf1c grown for 11 days on peat pellets under 14h light (100μmol photons m-2 s-1) / 10h dark cycles, 70% relative humidity at 21°C.

shift low to high light study 3 (2h) / low light study 4 (6h)

Relative Expression (log2-ratio):6.202256
Number of Samples:3 / 3
Experimental shift low to high light study 3 (2h)
Detached rosette leaves of 3.5-week-old Col-0 plants were kept in a growth chamber for 6h under low light (65µmol photons m-2 s-1) at 22°C, then exposed for 2h to high light (1300µmol photons m-2 s-1) at 22°C, and then harvested.
Control low light study 4 (6h)
Detached rosette leaves of 3.5- week-old Col-0 plants were kept in a growth chamber for 6h under low light (65µmol photons m-2 s-1) at 22°C and then harvested.

shift 28°C to 19°C study 2 (35S:RPS4-HS) / 28°C (35S:RPS4-HS)

Relative Expression (log2-ratio):-6.111841
Number of Samples:3 / 3
Experimental shift 28°C to 19°C study 2 (35S:RPS4-HS)
Leaf samples of 35S:RPS4-HS plants grown for 3.5 weeks on soil at 28°C and then shifted to 19°C for 8h. Other conditions: growth chamber, 10h light (150-200µmol photons m-2 s-1) / 14h dark cycles, 65% relative humidity.
Control 28°C (35S:RPS4-HS)
Leaf samples of 35S:RPS4-HS plants grown for 3.5 weeks on soil at 28°C under 10h light (150-200µmol photons m-2 s-1) / 14h dark cycles, 65% relative humidity.

QK / Ws

Relative Expression (log2-ratio):-5.939212
Number of Samples:2 / 2
Experimental QK
HSFA1a, b, d and e quadruple mutant.
Control Ws
Arabidopsis accession: Wassilewskija. Ws is susceptible to isolate Emwa1 of biotrophic filamentous oomycete pathogen Hyaloperonospora arabidopsidis (Hok et al., 2011, Plant Cell Environ. 34: 1944-1957).

heat study 4 / untreated plant samples

Relative Expression (log2-ratio):5.7667246
Number of Samples:2 / 2
Experimental heat study 4
Plant samples, grown in vitro under long day conditions at 22°C for three weeks, then exposed to 37°C for 30h (heat exposure started 3h after beginning of the light phase).
Control untreated plant samples
Plant samples, grown in vitro under long day conditions at 22°C for three weeks followed by additional 30h at the same temperature.