TOP TEN perturbations for 39135_at (Homo sapiens)
Organism: Homo sapiens
Gene: 39135_at
Selected probe(set): 212856_at
Platform: Affymetrix Human Genome U133 Plus 2.0 Array
Expression of 39135_at (212856_at) across 6674 perturbations tested by GENEVESTIGATOR:
F. tularensis study 1 (tularensis Schu S4) / uninfected peripheral blood monocyte sample
Relative Expression (log2-ratio):-3.130001Number of Samples:4 / 6
Experimental | F. tularensis study 1 (tularensis Schu S4) |
Peripheral blood monocytes infected with the Schu S4 isolate of Francisella tularensis (100 MOI) for 24 hours. | |
Control | uninfected peripheral blood monocyte sample |
Peripheral blood monocytes uninfected. |
lung cancer study 1 (PDX; pseudosarcomatous carcinoma; primary) / lung cancer study 1 (PDX; adenosquamous carcinoma; primary)
Relative Expression (log2-ratio):-2.999795Number of Samples:4 / 4
Experimental | lung cancer study 1 (PDX; pseudosarcomatous carcinoma; primary) |
Patient-derived xenograft (PDX) samples generated in female athymic nude mice from patients with primary pseudosarcomatous carcinoma of the lung (subcutaneously implanted). | |
Control | lung cancer study 1 (PDX; adenosquamous carcinoma; primary) |
Patient-derived xenograft (PDX) samples generated in female athymic nude mice from patients with primary adenosquamous carcinoma of the lung (subcutaneously implanted). |
E. coli study 2 / unstimulated, normal monocyte-derived macrophage sample
Relative Expression (log2-ratio):-2.8848715Number of Samples:5 / 7
Experimental | E. coli study 2 |
Monocyte-derived macrophage samples derived from healthy control subjects cultured for 4 hours with 2.5 × 105 heat-killed E. coli. | |
Control | unstimulated, normal monocyte-derived macrophage sample |
Monocyte-derived macrophage samples derived from healthy control subjects cultured for 4 hours unstimulated. |
adrenal gland cancer study 4 / normal adrenal cortex tissue
Relative Expression (log2-ratio):-2.6712608Number of Samples:43 / 4
Experimental | adrenal gland cancer study 4 |
Primary tumor tissue samples of the adrenal cortex from patients with adrenocortical carcinoma (ACC). | |
Control | normal adrenal cortex tissue |
Histological normal adrenal gland cortical tissue samples derived after autopsy. |
adrenal gland cancer study 2 / normal adrenal cortex tissue
Relative Expression (log2-ratio):-2.5377188Number of Samples:31 / 10
Experimental | adrenal gland cancer study 2 |
Primary tumor tissue samples of the adrenal cortex from patients with adrenocortical carcinoma. | |
Control | normal adrenal cortex tissue |
Unaffected adrenal cortex tissue from control objects. |
polyamide study 1 (mismatch) / mifepristone study 4
Relative Expression (log2-ratio):2.5355911Number of Samples:3 / 3
Experimental | polyamide study 1 (mismatch) |
Human non-small cell bronchoepithelial carcinoma cell line A549 grown in F12-K medium supplemented with 10% FBS and 4mM penicillin and streptomycin. After 24 hours the medium was replaced with F12-K containing 10% CT-FBS, 4mM penicillin/streptomycin and a mismatched synthetic DNA-binding polyamide (normally targeting the consensus sequence of the glucocorticoid receptor element and binding the glucocorticoid-induced zipper GILZ). After 48 hours 10nM dexamethasone was added to the cell culture. Samples were taken after additional 6 hours. | |
Control | mifepristone study 4 |
Human non-small cell bronchoepithelial carcinoma cell line A549 grown in F12-K medium supplemented with 10% FBS and 4mM penicillin and streptomycin. After 24 hours the medium was replaced with F12-K containing 10% CT-FBS, 4mM penicillin/streptomycin and 3µM of the glucocorticoid receptor antagonist mifepristone. After 48 hours 10nM dexamethasone was added to the cell culture. Samples were taken after additional 6 hours. ATC code: |
polyamide study 1 (mismatch) / vehicle (medium) treated A549 cell sample
Relative Expression (log2-ratio):2.5263824Number of Samples:3 / 3
Experimental | polyamide study 1 (mismatch) |
Human non-small cell bronchoepithelial carcinoma cell line A549 grown in F12-K medium supplemented with 10% FBS and 4mM penicillin and streptomycin. After 24 hours the medium was replaced with F12-K containing 10% CT-FBS, 4mM penicillin/streptomycin and a mismatched synthetic DNA-binding polyamide (normally targeting the consensus sequence of the glucocorticoid receptor element and binding the glucocorticoid-induced zipper GILZ). After 48 hours 10nM dexamethasone was added to the cell culture. Samples were taken after additional 6 hours. | |
Control | vehicle (medium) treated A549 cell sample |
Human non-small cell bronchoepithelial carcinoma cell line A549 grown in F12-K medium supplemented with 10% FBS and 4mM penicillin and streptomycin. After 24 hours the medium was replaced with F12-K containing 10% CT-FBS and 4mM penicillin/streptomycin. Samples were taken after additional 56 hours. |
heat shock study 1 (LPS) / untreated THP-1 cell sample
Relative Expression (log2-ratio):-2.440507Number of Samples:3 / 3
Experimental | heat shock study 1 (LPS) |
Cultured THP-1 mononuclear cells were treated with heat shock (43°C; 1h) and lipopolysaccharide (1ug/ml; 4h). | |
Control | untreated THP-1 cell sample |
Cultured THP-1 mononuclear cells were cultured in basal growth media at 37°C. |
E. coli study 1 / unstimulated, normal monocyte-derived macrophage sample
Relative Expression (log2-ratio):-2.3238745Number of Samples:12 / 16
Experimental | E. coli study 1 |
Monocyte-derived macrophage samples derived from healthy control subjects cultured for 4 hours with 2.5 × 105 heat-killed E. coli. | |
Control | unstimulated, normal monocyte-derived macrophage sample |
Monocyte-derived macrophage samples derived from healthy control subjects cultured for 4 hours unstimulated. |
IFN-g; LPS study 1 / normal resting monocyte sample
Relative Expression (log2-ratio):-2.2126083Number of Samples:2 / 2
Experimental | IFN-g; LPS study 1 |
Monocytes LPS/IFN-g activated for 30h. | |
Control | normal resting monocyte sample |
Monocytes resting for 30h. |