TOP TEN perturbations for 39341_at (Homo sapiens)
Organism: Homo sapiens
Gene: 39341_at
Selected probe(set): 209129_at
Platform: Affymetrix Human Genome U133 Plus 2.0 Array
Expression of 39341_at (209129_at) across 6674 perturbations tested by GENEVESTIGATOR:
Hep-G2 / HepaRG
Relative Expression (log2-ratio):-5.371208Number of Samples:9 / 12
Experimental | Hep-G2 |
Human primary cancer cell line derived from the liver of a patient with hepatocellular carcinoma. Synonyms:HEP-G2; Hep G2; HEP G2; HepG2; HEPG2 Cellosaurus code: | |
Control | HepaRG |
Immortalized cancer cell line derived from female patient with hepatocellular carcinoma. Cells can be induced to differentiate into hepatocyte-like cells by exposure to DMSO. Synonyms:Hepa-RG Cellosaurus code: |
hepatocyte (ESC) / Hep-G2
Relative Expression (log2-ratio):4.860914Number of Samples:8 / 9
Experimental | hepatocyte (ESC) |
Hepatocyte-like cells differentiated from embryonic stem cells (ESC) | |
Control | Hep-G2 |
Human primary cancer cell line derived from the liver of a patient with hepatocellular carcinoma. Synonyms:HEP-G2; Hep G2; HEP G2; HepG2; HEPG2 Cellosaurus code: |
SW620 / SW480
Relative Expression (log2-ratio):-4.834362Number of Samples:62 / 63
Experimental | SW620 |
Human metastatic cancer cell line derived from the lymph node of a patient with adenocarcinoma of the colon. Synonyms:SW-620; SW 620; SW.620 Cellosaurus code: | |
Control | SW480 |
Human primary cancer cell line derived from the colon of a male patient with adenocarcinoma. Synonyms:SW-480; SW 480; SW480E Cellosaurus code: |
RAF1 depletion study 1 / control vector transfected SW-480 cell sample
Relative Expression (log2-ratio):-3.9511147Number of Samples:6 / 6
Experimental | RAF1 depletion study 1 |
RNAi-mediated gene knockdown of RAF1 in colorectal cancer cell line SW-480. | |
Control | control vector transfected SW-480 cell sample |
SW-480 colorectal cell line sample transduced with empty vector pLKO. |
RAF1 depletion study 1 / mock transfected SW-480 cell sample
Relative Expression (log2-ratio):-3.852395Number of Samples:6 / 6
Experimental | RAF1 depletion study 1 |
RNAi-mediated gene knockdown of RAF1 in colorectal cancer cell line SW-480. | |
Control | mock transfected SW-480 cell sample |
SW-480 colorectal cell line sample transduced with non-targeting pLKO_NonTarget vector. |
OPM-1 / MM1.S
Relative Expression (log2-ratio):3.7653942Number of Samples:4 / 4
Experimental | OPM-1 |
Human primary cancer cell line derived from the peripheral blood of a patient with multiple myeloma. Dexamethasone-resistant. Synonyms:OPM1 Cellosaurus code: | |
Control | MM1.S |
Human primary cancer cell line derived from the peripheral blood of a patient with multiple myeloma. Dexamethasone-sensitive. Parental cell line:: MM.1 Synonyms:MM.1S; MM1-S; MM-1S; MM1S Cellosaurus code: |
RAF1 depletion study 1 / normal SW-480 cell sample
Relative Expression (log2-ratio):-3.6725626Number of Samples:6 / 3
Experimental | RAF1 depletion study 1 |
RNAi-mediated gene knockdown of RAF1 in colorectal cancer cell line SW-480. | |
Control | normal SW-480 cell sample |
Non-transduced SW-480 colorectal cell line sample. |
T-cell activation study 2 / quiescent CD4+ T-cell sample
Relative Expression (log2-ratio):3.2925873Number of Samples:2 / 2
Experimental | T-cell activation study 2 |
CD4+ T-cell samples derived from PBMC´s of HIV-seronegative donors were activated with plate bound CD3 (1ug/ml) and soluble CD28 (50ng/ml) for 2 days.. | |
Control | quiescent CD4+ T-cell sample |
Quiescent CD4+ T-cell samples derived from PBMC´s of HIV-seronegative donors. |
conditioned medium study 1 (HS5) / untreated monocyte (CD14+) sample
Relative Expression (log2-ratio):3.061409Number of Samples:2 / 2
Experimental | conditioned medium study 1 (HS5) |
CD14+ monocytes treated with HS5 conditioned medium (CM) for 48h. | |
Control | untreated monocyte (CD14+) sample |
Untreated CD14+ monocytes from two different donors. |
conditioned medium study 1 (HS27a) / untreated monocyte (CD14+) sample
Relative Expression (log2-ratio):2.9985218Number of Samples:2 / 2
Experimental | conditioned medium study 1 (HS27a) |
CD14+ monocytes treated with HS27a conditioned medium (CM) for 48h. | |
Control | untreated monocyte (CD14+) sample |
Untreated CD14+ monocytes from two different donors. |