Organism: Homo sapiens
Gene: 39972_at
Selected probe(set): 206190_at
Platform: Affymetrix Human Genome U133 Plus 2.0 Array

Expression of 39972_at (206190_at) across 6674 perturbations tested by GENEVESTIGATOR:

Relative Expression (log2-ratio):5.577076
Number of Samples:15 / 22

Experimental	brain tumor study 1 (pilocytic astrocytoma)
	Primary tumor tissue sample from the brain of patients with pilocytic astrocytoma.
Control	brain tumor study 1 (medulloblastoma)
	Primary tumor tissue sample from the brain of patients with medulloblastoma.

Relative Expression (log2-ratio):5.140128
Number of Samples:4 / 4

Experimental	stem cell differentiation study 59 (iDRG; 15d)
	Immature dorsal root ganglia neurons (iDRGs) obtained by differentiation of WA09 embryonic stem cells. WA09 cells were differentiated for 8 days and subsequently cryopreserved. After thawing, cells were further differentiated for 7 days. Further details are described in the paper.
Control	normal embryonic stem cell sample (WA09)
	Undifferentiated WA09 embryonic stem cell samples.

Relative Expression (log2-ratio):4.982703
Number of Samples:4 / 4

Experimental	stem cell differentiation study 59 (iDRG; 15d)
	Immature dorsal root ganglia neurons (iDRGs) obtained by differentiation of WA09 embryonic stem cells. WA09 cells were differentiated for 8 days and subsequently cryopreserved. After thawing, cells were further differentiated for 7 days. Further details are described in the paper.
Control	stem cell differentiation study 59 (iDRG; 9d)
	Immature dorsal root ganglia neurons (iDRGs) obtained by differentiation of WA09 embryonic stem cells. WA09 cells were differentiated for 8 days and subsequently cryopreserved. After thawing, cells were further differentiated for 1 day. Further details are described in the paper.

Relative Expression (log2-ratio):4.7464523
Number of Samples:4 / 4

Experimental	stem cell differentiation study 59 (iDRG; 15d)
	Immature dorsal root ganglia neurons (iDRGs) obtained by differentiation of WA09 embryonic stem cells. WA09 cells were differentiated for 8 days and subsequently cryopreserved. After thawing, cells were further differentiated for 7 days. Further details are described in the paper.
Control	stem cell differentiation study 59 (8d)
	WA09 embryonic stem cell samples differentiated for 8 days. Further details are described in the paper.

Relative Expression (log2-ratio):4.2141943
Number of Samples:15 / 46

Experimental	brain tumor study 1 (pilocytic astrocytoma)
	Primary tumor tissue sample from the brain of patients with pilocytic astrocytoma.
Control	brain tumor study 1 (ependymoma)
	Primary tumor tissue sample from the brain of patients with ependymoma.

Relative Expression (log2-ratio):4.0289536
Number of Samples:15 / 12

Experimental	brain tumor study 1 (pilocytic astrocytoma)
	Primary tumor tissue sample from the brain of patients with pilocytic astrocytoma.
Control	normal brain tissue
	Histologically normal and non-neoplastic tissue sample from different brain anatomical sites of patients with primary brain tumors.

Relative Expression (log2-ratio):3.869347
Number of Samples:3 / 3

Experimental	TGF-β study 12
	NCI-H358 cells were cultured for 2-3 weeks in the presence of 2ng/ml of TGF-β, to induce epithelial-mesenchymal transition (EMT). 24 hours prior analysis cells were re-seeded without TGF-β.
Control	untreated NCI-H358 cell sample
	NCI-H358 cells grown in standard media.

Relative Expression (log2-ratio):-3.8350005
Number of Samples:3 / 2

Experimental	glioma study 16 (secondary glioblastoma)
	Secondary glioma tissues obtained from the operating room. Tumors were diagnosed and graded according to the current WHO classification (grade IV).
Control	normal brain tissue
	Normal brain tissue sample from healthy donors.

Relative Expression (log2-ratio):3.3769522
Number of Samples:3 / 7

Experimental	connective/soft tissue cancer study 1 (PDX; connective and soft tissue, sarcoma, NOS; metastatic)
	Patient-derived xenograft (PDX) samples generated in female athymic nude mice from a metastasis of patients with primary connective and soft tissue, sarcoma, NOS of the soft tissue (subcutaneously implanted). Metastatic site of patient tumor sample is not reported.
Control	connective/soft tissue cancer study 1 (PDX; connective and soft tissue, sarcoma, NOS; primary)
	Patient-derived xenograft (PDX) samples generated in female athymic nude mice from patients with primary connective and soft tissue, sarcoma, NOS of the soft tissue (subcutaneously implanted).

Relative Expression (log2-ratio):3.2971315
Number of Samples:4 / 4

Experimental	stem cell differentiation study 59 (iDRG; 12d)
	Immature dorsal root ganglia neurons (iDRGs) obtained by differentiation of WA09 embryonic stem cells. WA09 cells were differentiated for 8 days and subsequently cryopreserved. After thawing, cells were further differentiated for 4 days. Further details are described in the paper.
Control	normal embryonic stem cell sample (WA09)
	Undifferentiated WA09 embryonic stem cell samples.